Topic 11: Measurement & Data Processing
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function of IR spectroscopy
• identifies the bonds in a molecule - since different bonds absorb different frequencies
how mass spectrometry works
• the gaseous molecules are shot with e-s to form cation fragments • the peak in the mass spectrum with the greatest mass comprises of ions that passed through unscathed • but other peaks appear as well (the cation fragments) • the ‘fragmentation patterns’ are then used to analyze the composition of the molecule • REMEMBER! generally the fragment that gives the most stable ion is formed!
index of hydrogen deficiency
• tells us how unsaturated the molecule is - the number tells us how many H2 molecules can be added
how IR spectroscopy works
• IR is absorbed by polar bonds and will cause stretching/bending • the change in energy produces a change in the molecule’s dipole moment • the intensity of the absorption depends on the bond polarity (more polar = more stretch/bend observed)
how IR spectroscopy works
• IR is absorbed by polar bonds and will cause stretching/bending • the change in energy produces a change in the molecule’s dipole moment • the intensity of the absorption depends on the bond polarity (more polar = more stretch/bend observed)
why is it that only polar bonds can interact w electromagnetic radiation?
• polar bonds have separate areas of partial positive and negative charges • this allows the electric field component to excite vibrational energy
trends in wavelength required to induce stretch/bend
• symmetric stretch/bend takes less energy than asymmetric • multiple bonds need higher frequencies e. g. ≡ 𝐶 − 𝐻 has higher wavenumber (≈3300) than = 𝐶 − 𝐻 (≈3100); and = 𝐶 − 𝐻 has higher wavenumber than −𝐶 − 𝐻 (≈2900) • in terms of hybridization, sp hybridization has 50% s-orbital character, sp2 has 33% s-orbital character and sp3 has 25% s-orbital character
how nuclear magnetic resonance (NMR) spectroscopy works
• uses radio waves to see how much energy is required to stimulate H+ in an element • using radio waves to see how much energy it is required to stimulate the protons (H+ ) in an element. Hydrogen atoms in different position in the molecule will require different amount of energy
principle behind NMR spectroscopy
• a proton has a spin that creates a magnetic field, just like a magnet bar • proton in its low energy state spins parallel to an external magnetic field (its N gets attracted to the southern magnetic pole, which is geographically the North Pole, and its S gets attracted to the northern magnetic pole, which is geographically the South Pole) • in NMR, energy is applied in the form of radio waves to flip the direction of magnetic field of hydrogen atoms • when these flipped protons flip back again to its low energy state, each one gives out energy that is recorded in the NMR spectrometer
NMR spectroscopy: what number of peaks tells you
tells you the number of possible “chemical environments” a hydrogen can be in
NMR spectroscopy: what the areas under the peaks tell you
i. e. integration trace - tells you how many protons are sending the signal - essentially reveals the ratio of H in the molecule
NMR spectroscopy: chemical shift
• the energy required to flip the proton in relation to energy required to flip TMS (tetramethylsilane, Si(CH3)4) • value depends on the environment
NMR spectroscopy: splitting pattern
AKA spin-spin splitting/coupling • the signals/peaks are actually split, not straight • this is because a proton’s magnetic field is influenced by neighboring protons • neighboring protons may spin in the same direction (thus intensifying the magnetic field) or in the opposite direction (thus decreasing the magnetic field) • this is because each proton can spin either up or down with equal probability • number of splitting = number of neighbor protons + 1
how x-ray crystallography works
• it sends X-ray radiation on a sample at an angle θ • we can deduce the bond length, bond angle, and the structure from the reflected radiation (either constructive or destructive)
why is TMS used as the standard for NMR?
• it has one peak; all hydrogens are in identical chemical environment • it is inert and has low boiling point (easily separated from other compounds) • silicon absorbs different wavelengths from carbon-hydrogen bonds (so it doesn’t interfere)
calculating chemical shift
chemical shift = (shift in relation to TMS / frequency of spectrometer) * 10^6