lecture 14
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Differences or changes in function or outcome
Phenotype
Changes in gene sequence
Genotype
Mutations can be made
Purposefully (induced) or not (spontaneous)
endonucleases that recognize specific DNA sequences and cleave DNA
Restriction enzymes
Type 2 Restriction Enzymes recognize and cut within a…
Specific DNA sequence
Type 2 Restriction Enzymes activity doesnt require energy (ATP) but needs…
Mg2+
Type 2 Restriction Enzymes sites are usually ____ 4-8 bp long
Palindromes
Type 2 Restriction Enzymes hydrolysis of phosphodiester bonds in the sugar-phosphate backbone of both strands of DNA
Cut
Type 2 Restriction Enzymes Cuts result in ____ or ____ (5’ or 3’ overhangs)
Blunt or Sticky ends
Type 2 Restriction Enzymes Activity can be prevented by…
Modification of DNA binding site E.g. methylation by methylase
Type 2 Restriction Enzymes Preventing activity Allows degradation of foreign DNA while leaving host DNA
Intact
Seperates cgarged molecules migrating in an electrical field. Charge, size, and shape dtermine mobility
Electrophoresis
Electrophoresis in a gel such as the polysaccharide ____ seperates linear DNA fragments by ____
Agarose/size
Often hybridization is done using ____ DNA fragments called primers or ____
Labeled/ Probes
Making many identical copies of somethimg
Cloning
Making many identical copies of a molecule-typically a fragment of DNA of interest
Molecular cloning
Molecular cloning is usaully done by moving a fragment of DNA into a ____ called a cloning ____ which is moved into a suitable host
Plasmid/vector/host
Molecular cloning Manipulation often done using restriction ____ and DNA ____
Enzymes/ligase
Engineered DNA fragments are called recombinant meaning
Recombined
Cloning with pUC 19 Digest vector and DNA insert with appropriate ____ ____
Restriction enzymes
Cloning with pUC 19 Join with DNA ____
Ligase
Cloning with pUC 19 Introduce into appropriate host plate on solid medium containing ____ and ____
Ampicillin and X-gal
Product of gene lacZ is
Beta-galactosidase
B-gal can cleave the substrate ____, resulting in a ____ colored product
X-gal/blue