2.4. Proteins
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Proteins contains:
Oxygen, Carbon, Hydrogen and Nitrogen and Sulphur
Amino acid function:
Are the molecules in which peptides and proteins are built.
Main components of the structural formula of Proteins
• An Amino group(-NH2) • An organic acid group(carboxyl group -COOH) • Side chain includes a_ R group
Protein types
There are 20 standard Amino acid groups
Peptide Bond/Linkages
Tow amino acids combine to form -> Dipeptide The (amino group) of one amino acid reacts with the (Carboxyl group) of another amino acid. remainder /yield = H2O
Condensation reaction:
a reaction in which two molecules combine to form a larger molecule, Bi product= H2O
Primary Structure
Sequence of amino acids. Sequence:Determines the shape and the structure of the protein.
Secondary structure:
Develops when part of polypeptide chain by coiling up take a particular shape eg. a-helix b-sheets these are permanent shapes held in place by hydrogen bonds.
Tertiary structure
• Made up of complex shape.(folded and held in Place) • Made permanent by four different bonds: • Established between adjacent parts of the atom(Hydrogen bond _Disulfade _Van der Waals_Ionic bond) • Tend to take much coils eg.Fibrous and globular
Quaternary Structure
-This arises when two or more proteins are held together.(Forming a complex, biologically active molecule)
Examples of Protein:
Insulin Rubisco Immunoglobulins Rhodopsin Collagen Spider silk
Proteome
• The actual proteins made by a cell. • Controlled by expression of genes. • Leads to cell’s phenotype.
Genes
• 20 different amino acids • Codons • DNA • mRNA strands
Protein structure
Amino acid Condensation reaction Dipeptide Polypeptide More than one polypeptide 3D shape